Portal:CPTAC

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CPTAC Pathways

Welcome to the CPTAC Pathway Portal

This portal highlights pathway content relevant to the Clinical Proteomic Tumor Analysis Consortium (CPTAC).

The National Cancer Institute, part of the National Institutes of Health, announced the launch of a Clinical Proteomic Tumor Analysis Consortium in August 2011. CPTAC is a comprehensive and coordinated effort to accelerate the understanding of the molecular basis of cancer through the application of robust, quantitative, proteomic technologies and workflows. The overarching goal of CPTAC is to improve our ability to diagnose, treat and prevent cancer. To achieve this goal in a scientifically rigorous manner, the NCI launched CPTAC to systematically identify proteins that derive from alterations in cancer genomes and related biological processes, and provide this data with accompanying assays and protocols to the public.

CPTAC-logo.png

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Cancer Hallmark Categories

Sustaining proliferative signaling MAPK Signaling Pathway (Homo sapiens)
invalid pathway title: MWException: Unable to convert to /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png:

Status: 1

Message:

Command: gpml2 --id 'WP2868' --pathway-version '94683' /home/wikipathways.org/images/wikipathways/d/da/WP2868_94683.gpml /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png in /home/wikipathways.org/extensions/GPMLConverter/src/Converter.php:110 Stack trace:

  1. 0 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(71): WikiPathways\GPML\Converter::convert('/home/wikipathw...', '/home/wikipathw...', Array)
  2. 1 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(40): WikiPathways\PathwayCache\Convertible->convert('/home/wikipathw...', '/home/wikipathw...')
  3. 2 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(73): WikiPathways\PathwayCache\Convertible->doRender()
  4. 3 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(83): WikiPathways\PathwayCache\Base->render()
  5. 4 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(193): WikiPathways\PathwayCache\Base->isCached()
  6. 5 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(84): WikiPathways\PathwayThumb::makeThumbLinkObj(Object(WikiPathways\Pathway), 'MAPK Signaling ...', 'https://vm1.wik...', 'MAPK Signaling ...', 'center', 'pwthumb', '250')
  7. 6 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayThumb::renderPathwayImage(Object(Parser), 'Pathway:WP2868', '250', 'center', 'MAPK Signaling ...', 'https://vm1.wik...', 'MAPK Signaling ...')
  8. 7 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pwImage', Array)
  9. 8 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  10. 9 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  11. 10 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  12. 11 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  13. 12 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{Template:Toda...')
  14. 13 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(651): Parser->internalParse('{{Template:Toda...', false, false)
  15. 14 /home/wikipathways.org/extensions/WikiPathways/src/PathwayOfTheDay.php(107): Parser->recursiveTagParse('{{Template:Toda...')
  16. 15 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayOfTheDay::get(Object(Parser), 'Saturday 25 May...', 'Portal:CPTAC/Ha...')
  17. 16 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pathwayOfTheDay', Array)
  18. 17 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  19. 18 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1727): PPFrame_DOM->expand(Object(DOMElement), 0)
  20. 19 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3302): PPTemplateFrame_DOM->cachedExpand('Portal:CPTAC/Ha...', Object(PPNode_DOM))
  21. 20 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  22. 21 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1798): PPFrame_DOM->expand(Object(DOMElement), 4)
  23. 22 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1810): PPTemplateFrame_DOM->getNamedArgument('contents')
  24. 23 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3801): PPTemplateFrame_DOM->getArgument('contents')
  25. 24 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1296): Parser->argSubstitution(Array, Object(PPTemplateFrame_DOM))
  26. 25 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  27. 26 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  28. 27 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  29. 28 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  30. 29 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  31. 30 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{{{FULLPAGENAM...')
  32. 31 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(443): Parser->internalParse('{{{{FULLPAGENAM...')
  33. 32 /home/wikipathways.org/mediawiki/includes/content/WikitextContent.php(323): Parser->parse('{{{{FULLPAGENAM...', Object(Title), Object(ParserOptions), true, true, 94683)
  34. 33 /home/wikipathways.org/mediawiki/includes/content/AbstractContent.php(516): WikitextContent->fillParserOutput(Object(Title), 94683, Object(ParserOptions), true, Object(ParserOutput))
  35. 34 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolWorkArticleView.php(144): AbstractContent->getParserOutput(Object(Title), 94683, Object(ParserOptions))
  36. 35 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolCounterWork.php(123): PoolWorkArticleView->doWork()
  37. 36 /home/wikipathways.org/mediawiki/includes/page/Article.php(604): PoolCounterWork->execute()
  38. 37 /home/wikipathways.org/mediawiki/includes/actions/ViewAction.php(68): Article->view()
  39. 38 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(500): ViewAction->show()
  40. 39 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(294): MediaWiki->performAction(Object(Article), Object(Title))
  41. 40 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(861): MediaWiki->performRequest()
  42. 41 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(524): MediaWiki->main()
  43. 42 /home/wikipathways.org/mediawiki/index.php(42): MediaWiki->run()
  44. 43 {main}
Evading growth suppressors G1 to S cell cycle control (Homo sapiens)
invalid pathway title: MWException: Unable to convert to /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png:

Status: 1

Message:

Command: gpml2 --id 'WP2868' --pathway-version '94683' /home/wikipathways.org/images/wikipathways/d/da/WP2868_94683.gpml /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png in /home/wikipathways.org/extensions/GPMLConverter/src/Converter.php:110 Stack trace:

  1. 0 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(71): WikiPathways\GPML\Converter::convert('/home/wikipathw...', '/home/wikipathw...', Array)
  2. 1 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(40): WikiPathways\PathwayCache\Convertible->convert('/home/wikipathw...', '/home/wikipathw...')
  3. 2 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(73): WikiPathways\PathwayCache\Convertible->doRender()
  4. 3 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(83): WikiPathways\PathwayCache\Base->render()
  5. 4 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(193): WikiPathways\PathwayCache\Base->isCached()
  6. 5 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(84): WikiPathways\PathwayThumb::makeThumbLinkObj(Object(WikiPathways\Pathway), 'G1 to S cell cy...', 'https://vm1.wik...', 'G1 to S cell cy...', 'center', 'pwthumb', '250')
  7. 6 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayThumb::renderPathwayImage(Object(Parser), 'Pathway:WP2868', '250', 'center', 'G1 to S cell cy...', 'https://vm1.wik...', 'G1 to S cell cy...')
  8. 7 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pwImage', Array)
  9. 8 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  10. 9 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  11. 10 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  12. 11 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  13. 12 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{Template:Toda...')
  14. 13 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(651): Parser->internalParse('{{Template:Toda...', false, false)
  15. 14 /home/wikipathways.org/extensions/WikiPathways/src/PathwayOfTheDay.php(107): Parser->recursiveTagParse('{{Template:Toda...')
  16. 15 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayOfTheDay::get(Object(Parser), 'Saturday 25 May...', 'Portal:CPTAC/Ha...')
  17. 16 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pathwayOfTheDay', Array)
  18. 17 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  19. 18 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1727): PPFrame_DOM->expand(Object(DOMElement), 0)
  20. 19 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3302): PPTemplateFrame_DOM->cachedExpand('Portal:CPTAC/Ha...', Object(PPNode_DOM))
  21. 20 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  22. 21 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1798): PPFrame_DOM->expand(Object(DOMElement), 4)
  23. 22 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1810): PPTemplateFrame_DOM->getNamedArgument('contents')
  24. 23 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3801): PPTemplateFrame_DOM->getArgument('contents')
  25. 24 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1296): Parser->argSubstitution(Array, Object(PPTemplateFrame_DOM))
  26. 25 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  27. 26 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  28. 27 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  29. 28 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  30. 29 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  31. 30 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{{{FULLPAGENAM...')
  32. 31 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(443): Parser->internalParse('{{{{FULLPAGENAM...')
  33. 32 /home/wikipathways.org/mediawiki/includes/content/WikitextContent.php(323): Parser->parse('{{{{FULLPAGENAM...', Object(Title), Object(ParserOptions), true, true, 94683)
  34. 33 /home/wikipathways.org/mediawiki/includes/content/AbstractContent.php(516): WikitextContent->fillParserOutput(Object(Title), 94683, Object(ParserOptions), true, Object(ParserOutput))
  35. 34 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolWorkArticleView.php(144): AbstractContent->getParserOutput(Object(Title), 94683, Object(ParserOptions))
  36. 35 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolCounterWork.php(123): PoolWorkArticleView->doWork()
  37. 36 /home/wikipathways.org/mediawiki/includes/page/Article.php(604): PoolCounterWork->execute()
  38. 37 /home/wikipathways.org/mediawiki/includes/actions/ViewAction.php(68): Article->view()
  39. 38 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(500): ViewAction->show()
  40. 39 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(294): MediaWiki->performAction(Object(Article), Object(Title))
  41. 40 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(861): MediaWiki->performRequest()
  42. 41 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(524): MediaWiki->main()
  43. 42 /home/wikipathways.org/mediawiki/index.php(42): MediaWiki->run()
  44. 43 {main}
Activating invasion and metastasis Integrin-mediated Cell Adhesion (Homo sapiens)
invalid pathway title: MWException: Unable to convert to /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png:

Status: 1

Message:

Command: gpml2 --id 'WP2868' --pathway-version '94683' /home/wikipathways.org/images/wikipathways/d/da/WP2868_94683.gpml /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png in /home/wikipathways.org/extensions/GPMLConverter/src/Converter.php:110 Stack trace:

  1. 0 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(71): WikiPathways\GPML\Converter::convert('/home/wikipathw...', '/home/wikipathw...', Array)
  2. 1 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(40): WikiPathways\PathwayCache\Convertible->convert('/home/wikipathw...', '/home/wikipathw...')
  3. 2 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(73): WikiPathways\PathwayCache\Convertible->doRender()
  4. 3 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(83): WikiPathways\PathwayCache\Base->render()
  5. 4 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(193): WikiPathways\PathwayCache\Base->isCached()
  6. 5 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(84): WikiPathways\PathwayThumb::makeThumbLinkObj(Object(WikiPathways\Pathway), 'Integrin-mediat...', 'https://vm1.wik...', 'Integrin-mediat...', 'center', 'pwthumb', '250')
  7. 6 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayThumb::renderPathwayImage(Object(Parser), 'Pathway:WP2868', '250', 'center', 'Integrin-mediat...', 'https://vm1.wik...', 'Integrin-mediat...')
  8. 7 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pwImage', Array)
  9. 8 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  10. 9 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  11. 10 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  12. 11 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  13. 12 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{Template:Toda...')
  14. 13 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(651): Parser->internalParse('{{Template:Toda...', false, false)
  15. 14 /home/wikipathways.org/extensions/WikiPathways/src/PathwayOfTheDay.php(107): Parser->recursiveTagParse('{{Template:Toda...')
  16. 15 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayOfTheDay::get(Object(Parser), 'Saturday 25 May...', 'Portal:CPTAC/Ha...')
  17. 16 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pathwayOfTheDay', Array)
  18. 17 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  19. 18 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1727): PPFrame_DOM->expand(Object(DOMElement), 0)
  20. 19 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3302): PPTemplateFrame_DOM->cachedExpand('Portal:CPTAC/Ha...', Object(PPNode_DOM))
  21. 20 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  22. 21 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1798): PPFrame_DOM->expand(Object(DOMElement), 4)
  23. 22 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1810): PPTemplateFrame_DOM->getNamedArgument('contents')
  24. 23 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3801): PPTemplateFrame_DOM->getArgument('contents')
  25. 24 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1296): Parser->argSubstitution(Array, Object(PPTemplateFrame_DOM))
  26. 25 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  27. 26 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  28. 27 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  29. 28 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  30. 29 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  31. 30 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{{{FULLPAGENAM...')
  32. 31 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(443): Parser->internalParse('{{{{FULLPAGENAM...')
  33. 32 /home/wikipathways.org/mediawiki/includes/content/WikitextContent.php(323): Parser->parse('{{{{FULLPAGENAM...', Object(Title), Object(ParserOptions), true, true, 94683)
  34. 33 /home/wikipathways.org/mediawiki/includes/content/AbstractContent.php(516): WikitextContent->fillParserOutput(Object(Title), 94683, Object(ParserOptions), true, Object(ParserOutput))
  35. 34 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolWorkArticleView.php(144): AbstractContent->getParserOutput(Object(Title), 94683, Object(ParserOptions))
  36. 35 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolCounterWork.php(123): PoolWorkArticleView->doWork()
  37. 36 /home/wikipathways.org/mediawiki/includes/page/Article.php(604): PoolCounterWork->execute()
  38. 37 /home/wikipathways.org/mediawiki/includes/actions/ViewAction.php(68): Article->view()
  39. 38 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(500): ViewAction->show()
  40. 39 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(294): MediaWiki->performAction(Object(Article), Object(Title))
  41. 40 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(861): MediaWiki->performRequest()
  42. 41 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(524): MediaWiki->main()
  43. 42 /home/wikipathways.org/mediawiki/index.php(42): MediaWiki->run()
  44. 43 {main}
Enabling replicative immortality Notch Signaling Pathway (Homo sapiens)
invalid pathway title: MWException: Unable to convert to /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png:

Status: 1

Message:

Command: gpml2 --id 'WP2868' --pathway-version '94683' /home/wikipathways.org/images/wikipathways/d/da/WP2868_94683.gpml /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png in /home/wikipathways.org/extensions/GPMLConverter/src/Converter.php:110 Stack trace:

  1. 0 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(71): WikiPathways\GPML\Converter::convert('/home/wikipathw...', '/home/wikipathw...', Array)
  2. 1 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(40): WikiPathways\PathwayCache\Convertible->convert('/home/wikipathw...', '/home/wikipathw...')
  3. 2 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(73): WikiPathways\PathwayCache\Convertible->doRender()
  4. 3 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(83): WikiPathways\PathwayCache\Base->render()
  5. 4 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(193): WikiPathways\PathwayCache\Base->isCached()
  6. 5 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(84): WikiPathways\PathwayThumb::makeThumbLinkObj(Object(WikiPathways\Pathway), 'Notch Signaling...', 'https://vm1.wik...', 'Notch Signaling...', 'center', 'pwthumb', '250')
  7. 6 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayThumb::renderPathwayImage(Object(Parser), 'Pathway:WP2868', '250', 'center', 'Notch Signaling...', 'https://vm1.wik...', 'Notch Signaling...')
  8. 7 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pwImage', Array)
  9. 8 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  10. 9 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  11. 10 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  12. 11 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  13. 12 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{Template:Toda...')
  14. 13 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(651): Parser->internalParse('{{Template:Toda...', false, false)
  15. 14 /home/wikipathways.org/extensions/WikiPathways/src/PathwayOfTheDay.php(107): Parser->recursiveTagParse('{{Template:Toda...')
  16. 15 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayOfTheDay::get(Object(Parser), 'Saturday 25 May...', 'Portal:CPTAC/Ha...')
  17. 16 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pathwayOfTheDay', Array)
  18. 17 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  19. 18 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1727): PPFrame_DOM->expand(Object(DOMElement), 0)
  20. 19 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3302): PPTemplateFrame_DOM->cachedExpand('Portal:CPTAC/Ha...', Object(PPNode_DOM))
  21. 20 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  22. 21 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1798): PPFrame_DOM->expand(Object(DOMElement), 4)
  23. 22 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1810): PPTemplateFrame_DOM->getNamedArgument('contents')
  24. 23 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3801): PPTemplateFrame_DOM->getArgument('contents')
  25. 24 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1296): Parser->argSubstitution(Array, Object(PPTemplateFrame_DOM))
  26. 25 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  27. 26 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  28. 27 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  29. 28 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  30. 29 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  31. 30 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{{{FULLPAGENAM...')
  32. 31 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(443): Parser->internalParse('{{{{FULLPAGENAM...')
  33. 32 /home/wikipathways.org/mediawiki/includes/content/WikitextContent.php(323): Parser->parse('{{{{FULLPAGENAM...', Object(Title), Object(ParserOptions), true, true, 94683)
  34. 33 /home/wikipathways.org/mediawiki/includes/content/AbstractContent.php(516): WikitextContent->fillParserOutput(Object(Title), 94683, Object(ParserOptions), true, Object(ParserOutput))
  35. 34 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolWorkArticleView.php(144): AbstractContent->getParserOutput(Object(Title), 94683, Object(ParserOptions))
  36. 35 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolCounterWork.php(123): PoolWorkArticleView->doWork()
  37. 36 /home/wikipathways.org/mediawiki/includes/page/Article.php(604): PoolCounterWork->execute()
  38. 37 /home/wikipathways.org/mediawiki/includes/actions/ViewAction.php(68): Article->view()
  39. 38 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(500): ViewAction->show()
  40. 39 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(294): MediaWiki->performAction(Object(Article), Object(Title))
  41. 40 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(861): MediaWiki->performRequest()
  42. 41 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(524): MediaWiki->main()
  43. 42 /home/wikipathways.org/mediawiki/index.php(42): MediaWiki->run()
  44. 43 {main}
Inducing angiogenesis PDGF Pathway (Homo sapiens)
invalid pathway title: MWException: Unable to convert to /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png:

Status: 1

Message:

Command: gpml2 --id 'WP2868' --pathway-version '94683' /home/wikipathways.org/images/wikipathways/d/da/WP2868_94683.gpml /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png in /home/wikipathways.org/extensions/GPMLConverter/src/Converter.php:110 Stack trace:

  1. 0 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(71): WikiPathways\GPML\Converter::convert('/home/wikipathw...', '/home/wikipathw...', Array)
  2. 1 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(40): WikiPathways\PathwayCache\Convertible->convert('/home/wikipathw...', '/home/wikipathw...')
  3. 2 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(73): WikiPathways\PathwayCache\Convertible->doRender()
  4. 3 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(83): WikiPathways\PathwayCache\Base->render()
  5. 4 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(193): WikiPathways\PathwayCache\Base->isCached()
  6. 5 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(84): WikiPathways\PathwayThumb::makeThumbLinkObj(Object(WikiPathways\Pathway), 'PDGF Pathway', 'https://vm1.wik...', 'PDGF Pathway', 'center', 'pwthumb', '250')
  7. 6 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayThumb::renderPathwayImage(Object(Parser), 'Pathway:WP2868', '250', 'center', 'PDGF Pathway', 'https://vm1.wik...', 'PDGF Pathway')
  8. 7 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pwImage', Array)
  9. 8 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  10. 9 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  11. 10 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  12. 11 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  13. 12 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{Template:Toda...')
  14. 13 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(651): Parser->internalParse('{{Template:Toda...', false, false)
  15. 14 /home/wikipathways.org/extensions/WikiPathways/src/PathwayOfTheDay.php(107): Parser->recursiveTagParse('{{Template:Toda...')
  16. 15 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayOfTheDay::get(Object(Parser), 'Saturday 25 May...', 'Portal:CPTAC/Ha...')
  17. 16 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pathwayOfTheDay', Array)
  18. 17 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  19. 18 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1727): PPFrame_DOM->expand(Object(DOMElement), 0)
  20. 19 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3302): PPTemplateFrame_DOM->cachedExpand('Portal:CPTAC/Ha...', Object(PPNode_DOM))
  21. 20 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  22. 21 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1798): PPFrame_DOM->expand(Object(DOMElement), 4)
  23. 22 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1810): PPTemplateFrame_DOM->getNamedArgument('contents')
  24. 23 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3801): PPTemplateFrame_DOM->getArgument('contents')
  25. 24 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1296): Parser->argSubstitution(Array, Object(PPTemplateFrame_DOM))
  26. 25 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  27. 26 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  28. 27 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  29. 28 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  30. 29 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  31. 30 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{{{FULLPAGENAM...')
  32. 31 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(443): Parser->internalParse('{{{{FULLPAGENAM...')
  33. 32 /home/wikipathways.org/mediawiki/includes/content/WikitextContent.php(323): Parser->parse('{{{{FULLPAGENAM...', Object(Title), Object(ParserOptions), true, true, 94683)
  34. 33 /home/wikipathways.org/mediawiki/includes/content/AbstractContent.php(516): WikitextContent->fillParserOutput(Object(Title), 94683, Object(ParserOptions), true, Object(ParserOutput))
  35. 34 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolWorkArticleView.php(144): AbstractContent->getParserOutput(Object(Title), 94683, Object(ParserOptions))
  36. 35 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolCounterWork.php(123): PoolWorkArticleView->doWork()
  37. 36 /home/wikipathways.org/mediawiki/includes/page/Article.php(604): PoolCounterWork->execute()
  38. 37 /home/wikipathways.org/mediawiki/includes/actions/ViewAction.php(68): Article->view()
  39. 38 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(500): ViewAction->show()
  40. 39 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(294): MediaWiki->performAction(Object(Article), Object(Title))
  41. 40 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(861): MediaWiki->performRequest()
  42. 41 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(524): MediaWiki->main()
  43. 42 /home/wikipathways.org/mediawiki/index.php(42): MediaWiki->run()
  44. 43 {main}
Resisting cell death PI3K-AKT-mTOR signaling pathway and therapeutic opportunities (Homo sapiens)
invalid pathway title: MWException: Unable to convert to /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png:

Status: 1

Message:

Command: gpml2 --id 'WP2868' --pathway-version '94683' /home/wikipathways.org/images/wikipathways/d/da/WP2868_94683.gpml /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png in /home/wikipathways.org/extensions/GPMLConverter/src/Converter.php:110 Stack trace:

  1. 0 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(71): WikiPathways\GPML\Converter::convert('/home/wikipathw...', '/home/wikipathw...', Array)
  2. 1 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(40): WikiPathways\PathwayCache\Convertible->convert('/home/wikipathw...', '/home/wikipathw...')
  3. 2 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(73): WikiPathways\PathwayCache\Convertible->doRender()
  4. 3 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(83): WikiPathways\PathwayCache\Base->render()
  5. 4 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(193): WikiPathways\PathwayCache\Base->isCached()
  6. 5 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(84): WikiPathways\PathwayThumb::makeThumbLinkObj(Object(WikiPathways\Pathway), 'PI3K-AKT-mTOR s...', 'https://vm1.wik...', 'PI3K-AKT-mTOR s...', 'center', 'pwthumb', '250')
  7. 6 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayThumb::renderPathwayImage(Object(Parser), 'Pathway:WP2868', '250', 'center', 'PI3K-AKT-mTOR s...', 'https://vm1.wik...', 'PI3K-AKT-mTOR s...')
  8. 7 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pwImage', Array)
  9. 8 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  10. 9 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  11. 10 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  12. 11 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  13. 12 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{Template:Toda...')
  14. 13 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(651): Parser->internalParse('{{Template:Toda...', false, false)
  15. 14 /home/wikipathways.org/extensions/WikiPathways/src/PathwayOfTheDay.php(107): Parser->recursiveTagParse('{{Template:Toda...')
  16. 15 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayOfTheDay::get(Object(Parser), 'Saturday 25 May...', 'Portal:CPTAC/Ha...')
  17. 16 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pathwayOfTheDay', Array)
  18. 17 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  19. 18 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1727): PPFrame_DOM->expand(Object(DOMElement), 0)
  20. 19 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3302): PPTemplateFrame_DOM->cachedExpand('Portal:CPTAC/Ha...', Object(PPNode_DOM))
  21. 20 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  22. 21 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1798): PPFrame_DOM->expand(Object(DOMElement), 4)
  23. 22 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1810): PPTemplateFrame_DOM->getNamedArgument('contents')
  24. 23 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3801): PPTemplateFrame_DOM->getArgument('contents')
  25. 24 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1296): Parser->argSubstitution(Array, Object(PPTemplateFrame_DOM))
  26. 25 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  27. 26 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  28. 27 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  29. 28 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  30. 29 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  31. 30 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{{{FULLPAGENAM...')
  32. 31 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(443): Parser->internalParse('{{{{FULLPAGENAM...')
  33. 32 /home/wikipathways.org/mediawiki/includes/content/WikitextContent.php(323): Parser->parse('{{{{FULLPAGENAM...', Object(Title), Object(ParserOptions), true, true, 94683)
  34. 33 /home/wikipathways.org/mediawiki/includes/content/AbstractContent.php(516): WikitextContent->fillParserOutput(Object(Title), 94683, Object(ParserOptions), true, Object(ParserOutput))
  35. 34 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolWorkArticleView.php(144): AbstractContent->getParserOutput(Object(Title), 94683, Object(ParserOptions))
  36. 35 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolCounterWork.php(123): PoolWorkArticleView->doWork()
  37. 36 /home/wikipathways.org/mediawiki/includes/page/Article.php(604): PoolCounterWork->execute()
  38. 37 /home/wikipathways.org/mediawiki/includes/actions/ViewAction.php(68): Article->view()
  39. 38 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(500): ViewAction->show()
  40. 39 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(294): MediaWiki->performAction(Object(Article), Object(Title))
  41. 40 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(861): MediaWiki->performRequest()
  42. 41 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(524): MediaWiki->main()
  43. 42 /home/wikipathways.org/mediawiki/index.php(42): MediaWiki->run()
  44. 43 {main}
Deregulating cellular energetics Glycolysis and Gluconeogenesis (Homo sapiens)
invalid pathway title: MWException: Unable to convert to /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png:

Status: 1

Message:

Command: gpml2 --id 'WP2868' --pathway-version '94683' /home/wikipathways.org/images/wikipathways/d/da/WP2868_94683.gpml /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png in /home/wikipathways.org/extensions/GPMLConverter/src/Converter.php:110 Stack trace:

  1. 0 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(71): WikiPathways\GPML\Converter::convert('/home/wikipathw...', '/home/wikipathw...', Array)
  2. 1 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(40): WikiPathways\PathwayCache\Convertible->convert('/home/wikipathw...', '/home/wikipathw...')
  3. 2 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(73): WikiPathways\PathwayCache\Convertible->doRender()
  4. 3 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(83): WikiPathways\PathwayCache\Base->render()
  5. 4 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(193): WikiPathways\PathwayCache\Base->isCached()
  6. 5 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(84): WikiPathways\PathwayThumb::makeThumbLinkObj(Object(WikiPathways\Pathway), 'Glycolysis and ...', 'https://vm1.wik...', 'Glycolysis and ...', 'center', 'pwthumb', '250')
  7. 6 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayThumb::renderPathwayImage(Object(Parser), 'Pathway:WP2868', '250', 'center', 'Glycolysis and ...', 'https://vm1.wik...', 'Glycolysis and ...')
  8. 7 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pwImage', Array)
  9. 8 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  10. 9 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  11. 10 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  12. 11 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  13. 12 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{Template:Toda...')
  14. 13 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(651): Parser->internalParse('{{Template:Toda...', false, false)
  15. 14 /home/wikipathways.org/extensions/WikiPathways/src/PathwayOfTheDay.php(107): Parser->recursiveTagParse('{{Template:Toda...')
  16. 15 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayOfTheDay::get(Object(Parser), 'Saturday 25 May...', 'Portal:CPTAC/Ha...')
  17. 16 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pathwayOfTheDay', Array)
  18. 17 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  19. 18 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1727): PPFrame_DOM->expand(Object(DOMElement), 0)
  20. 19 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3302): PPTemplateFrame_DOM->cachedExpand('Portal:CPTAC/Ha...', Object(PPNode_DOM))
  21. 20 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  22. 21 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1798): PPFrame_DOM->expand(Object(DOMElement), 4)
  23. 22 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1810): PPTemplateFrame_DOM->getNamedArgument('contents')
  24. 23 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3801): PPTemplateFrame_DOM->getArgument('contents')
  25. 24 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1296): Parser->argSubstitution(Array, Object(PPTemplateFrame_DOM))
  26. 25 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  27. 26 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  28. 27 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  29. 28 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  30. 29 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  31. 30 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{{{FULLPAGENAM...')
  32. 31 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(443): Parser->internalParse('{{{{FULLPAGENAM...')
  33. 32 /home/wikipathways.org/mediawiki/includes/content/WikitextContent.php(323): Parser->parse('{{{{FULLPAGENAM...', Object(Title), Object(ParserOptions), true, true, 94683)
  34. 33 /home/wikipathways.org/mediawiki/includes/content/AbstractContent.php(516): WikitextContent->fillParserOutput(Object(Title), 94683, Object(ParserOptions), true, Object(ParserOutput))
  35. 34 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolWorkArticleView.php(144): AbstractContent->getParserOutput(Object(Title), 94683, Object(ParserOptions))
  36. 35 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolCounterWork.php(123): PoolWorkArticleView->doWork()
  37. 36 /home/wikipathways.org/mediawiki/includes/page/Article.php(604): PoolCounterWork->execute()
  38. 37 /home/wikipathways.org/mediawiki/includes/actions/ViewAction.php(68): Article->view()
  39. 38 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(500): ViewAction->show()
  40. 39 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(294): MediaWiki->performAction(Object(Article), Object(Title))
  41. 40 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(861): MediaWiki->performRequest()
  42. 41 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(524): MediaWiki->main()
  43. 42 /home/wikipathways.org/mediawiki/index.php(42): MediaWiki->run()
  44. 43 {main}
Genome instability and mutation ATM Signaling Pathway (Homo sapiens)
invalid pathway title: MWException: Unable to convert to /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png:

Status: 1

Message:

Command: gpml2 --id 'WP2868' --pathway-version '94683' /home/wikipathways.org/images/wikipathways/d/da/WP2868_94683.gpml /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png in /home/wikipathways.org/extensions/GPMLConverter/src/Converter.php:110 Stack trace:

  1. 0 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(71): WikiPathways\GPML\Converter::convert('/home/wikipathw...', '/home/wikipathw...', Array)
  2. 1 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(40): WikiPathways\PathwayCache\Convertible->convert('/home/wikipathw...', '/home/wikipathw...')
  3. 2 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(73): WikiPathways\PathwayCache\Convertible->doRender()
  4. 3 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(83): WikiPathways\PathwayCache\Base->render()
  5. 4 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(193): WikiPathways\PathwayCache\Base->isCached()
  6. 5 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(84): WikiPathways\PathwayThumb::makeThumbLinkObj(Object(WikiPathways\Pathway), 'ATM Signaling P...', 'https://vm1.wik...', 'ATM Signaling P...', 'center', 'pwthumb', '250')
  7. 6 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayThumb::renderPathwayImage(Object(Parser), 'Pathway:WP2868', '250', 'center', 'ATM Signaling P...', 'https://vm1.wik...', 'ATM Signaling P...')
  8. 7 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pwImage', Array)
  9. 8 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  10. 9 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  11. 10 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  12. 11 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  13. 12 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{Template:Toda...')
  14. 13 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(651): Parser->internalParse('{{Template:Toda...', false, false)
  15. 14 /home/wikipathways.org/extensions/WikiPathways/src/PathwayOfTheDay.php(107): Parser->recursiveTagParse('{{Template:Toda...')
  16. 15 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayOfTheDay::get(Object(Parser), 'Saturday 25 May...', 'Portal:CPTAC/Ha...')
  17. 16 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pathwayOfTheDay', Array)
  18. 17 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  19. 18 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1727): PPFrame_DOM->expand(Object(DOMElement), 0)
  20. 19 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3302): PPTemplateFrame_DOM->cachedExpand('Portal:CPTAC/Ha...', Object(PPNode_DOM))
  21. 20 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  22. 21 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1798): PPFrame_DOM->expand(Object(DOMElement), 4)
  23. 22 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1810): PPTemplateFrame_DOM->getNamedArgument('contents')
  24. 23 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3801): PPTemplateFrame_DOM->getArgument('contents')
  25. 24 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1296): Parser->argSubstitution(Array, Object(PPTemplateFrame_DOM))
  26. 25 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  27. 26 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  28. 27 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  29. 28 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  30. 29 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  31. 30 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{{{FULLPAGENAM...')
  32. 31 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(443): Parser->internalParse('{{{{FULLPAGENAM...')
  33. 32 /home/wikipathways.org/mediawiki/includes/content/WikitextContent.php(323): Parser->parse('{{{{FULLPAGENAM...', Object(Title), Object(ParserOptions), true, true, 94683)
  34. 33 /home/wikipathways.org/mediawiki/includes/content/AbstractContent.php(516): WikitextContent->fillParserOutput(Object(Title), 94683, Object(ParserOptions), true, Object(ParserOutput))
  35. 34 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolWorkArticleView.php(144): AbstractContent->getParserOutput(Object(Title), 94683, Object(ParserOptions))
  36. 35 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolCounterWork.php(123): PoolWorkArticleView->doWork()
  37. 36 /home/wikipathways.org/mediawiki/includes/page/Article.php(604): PoolCounterWork->execute()
  38. 37 /home/wikipathways.org/mediawiki/includes/actions/ViewAction.php(68): Article->view()
  39. 38 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(500): ViewAction->show()
  40. 39 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(294): MediaWiki->performAction(Object(Article), Object(Title))
  41. 40 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(861): MediaWiki->performRequest()
  42. 41 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(524): MediaWiki->main()
  43. 42 /home/wikipathways.org/mediawiki/index.php(42): MediaWiki->run()
  44. 43 {main}
Tumor promoting inflammation Cytokines and Inflammatory Response (Homo sapiens)
invalid pathway title: MWException: Unable to convert to /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png:

Status: 1

Message:

Command: gpml2 --id 'WP2868' --pathway-version '94683' /home/wikipathways.org/images/wikipathways/d/da/WP2868_94683.gpml /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png in /home/wikipathways.org/extensions/GPMLConverter/src/Converter.php:110 Stack trace:

  1. 0 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(71): WikiPathways\GPML\Converter::convert('/home/wikipathw...', '/home/wikipathw...', Array)
  2. 1 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(40): WikiPathways\PathwayCache\Convertible->convert('/home/wikipathw...', '/home/wikipathw...')
  3. 2 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(73): WikiPathways\PathwayCache\Convertible->doRender()
  4. 3 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(83): WikiPathways\PathwayCache\Base->render()
  5. 4 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(193): WikiPathways\PathwayCache\Base->isCached()
  6. 5 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(84): WikiPathways\PathwayThumb::makeThumbLinkObj(Object(WikiPathways\Pathway), 'Cytokines and I...', 'https://vm1.wik...', 'Cytokines and I...', 'center', 'pwthumb', '250')
  7. 6 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayThumb::renderPathwayImage(Object(Parser), 'Pathway:WP2868', '250', 'center', 'Cytokines and I...', 'https://vm1.wik...', 'Cytokines and I...')
  8. 7 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pwImage', Array)
  9. 8 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  10. 9 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  11. 10 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  12. 11 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  13. 12 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{Template:Toda...')
  14. 13 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(651): Parser->internalParse('{{Template:Toda...', false, false)
  15. 14 /home/wikipathways.org/extensions/WikiPathways/src/PathwayOfTheDay.php(107): Parser->recursiveTagParse('{{Template:Toda...')
  16. 15 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayOfTheDay::get(Object(Parser), 'Saturday 25 May...', 'Portal:CPTAC/Ha...')
  17. 16 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pathwayOfTheDay', Array)
  18. 17 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  19. 18 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1727): PPFrame_DOM->expand(Object(DOMElement), 0)
  20. 19 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3302): PPTemplateFrame_DOM->cachedExpand('Portal:CPTAC/Ha...', Object(PPNode_DOM))
  21. 20 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  22. 21 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1798): PPFrame_DOM->expand(Object(DOMElement), 4)
  23. 22 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1810): PPTemplateFrame_DOM->getNamedArgument('contents')
  24. 23 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3801): PPTemplateFrame_DOM->getArgument('contents')
  25. 24 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1296): Parser->argSubstitution(Array, Object(PPTemplateFrame_DOM))
  26. 25 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  27. 26 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  28. 27 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  29. 28 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  30. 29 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  31. 30 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{{{FULLPAGENAM...')
  32. 31 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(443): Parser->internalParse('{{{{FULLPAGENAM...')
  33. 32 /home/wikipathways.org/mediawiki/includes/content/WikitextContent.php(323): Parser->parse('{{{{FULLPAGENAM...', Object(Title), Object(ParserOptions), true, true, 94683)
  34. 33 /home/wikipathways.org/mediawiki/includes/content/AbstractContent.php(516): WikitextContent->fillParserOutput(Object(Title), 94683, Object(ParserOptions), true, Object(ParserOutput))
  35. 34 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolWorkArticleView.php(144): AbstractContent->getParserOutput(Object(Title), 94683, Object(ParserOptions))
  36. 35 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolCounterWork.php(123): PoolWorkArticleView->doWork()
  37. 36 /home/wikipathways.org/mediawiki/includes/page/Article.php(604): PoolCounterWork->execute()
  38. 37 /home/wikipathways.org/mediawiki/includes/actions/ViewAction.php(68): Article->view()
  39. 38 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(500): ViewAction->show()
  40. 39 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(294): MediaWiki->performAction(Object(Article), Object(Title))
  41. 40 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(861): MediaWiki->performRequest()
  42. 41 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(524): MediaWiki->main()
  43. 42 /home/wikipathways.org/mediawiki/index.php(42): MediaWiki->run()
  44. 43 {main}
Avoiding immune destruction Interferon type I signaling pathways (Homo sapiens)
invalid pathway title: MWException: Unable to convert to /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png:

Status: 1

Message:

Command: gpml2 --id 'WP2868' --pathway-version '94683' /home/wikipathways.org/images/wikipathways/d/da/WP2868_94683.gpml /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png in /home/wikipathways.org/extensions/GPMLConverter/src/Converter.php:110 Stack trace:

  1. 0 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(71): WikiPathways\GPML\Converter::convert('/home/wikipathw...', '/home/wikipathw...', Array)
  2. 1 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(40): WikiPathways\PathwayCache\Convertible->convert('/home/wikipathw...', '/home/wikipathw...')
  3. 2 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(73): WikiPathways\PathwayCache\Convertible->doRender()
  4. 3 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(83): WikiPathways\PathwayCache\Base->render()
  5. 4 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(193): WikiPathways\PathwayCache\Base->isCached()
  6. 5 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(84): WikiPathways\PathwayThumb::makeThumbLinkObj(Object(WikiPathways\Pathway), 'Interferon type...', 'https://vm1.wik...', 'Interferon type...', 'center', 'pwthumb', '250')
  7. 6 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayThumb::renderPathwayImage(Object(Parser), 'Pathway:WP2868', '250', 'center', 'Interferon type...', 'https://vm1.wik...', 'Interferon type...')
  8. 7 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pwImage', Array)
  9. 8 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  10. 9 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  11. 10 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  12. 11 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  13. 12 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{Template:Toda...')
  14. 13 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(651): Parser->internalParse('{{Template:Toda...', false, false)
  15. 14 /home/wikipathways.org/extensions/WikiPathways/src/PathwayOfTheDay.php(107): Parser->recursiveTagParse('{{Template:Toda...')
  16. 15 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayOfTheDay::get(Object(Parser), 'Saturday 25 May...', 'Portal:CPTAC/Ha...')
  17. 16 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pathwayOfTheDay', Array)
  18. 17 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  19. 18 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1727): PPFrame_DOM->expand(Object(DOMElement), 0)
  20. 19 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3302): PPTemplateFrame_DOM->cachedExpand('Portal:CPTAC/Ha...', Object(PPNode_DOM))
  21. 20 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  22. 21 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1798): PPFrame_DOM->expand(Object(DOMElement), 4)
  23. 22 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1810): PPTemplateFrame_DOM->getNamedArgument('contents')
  24. 23 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3801): PPTemplateFrame_DOM->getArgument('contents')
  25. 24 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1296): Parser->argSubstitution(Array, Object(PPTemplateFrame_DOM))
  26. 25 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  27. 26 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  28. 27 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  29. 28 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  30. 29 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  31. 30 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{{{FULLPAGENAM...')
  32. 31 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(443): Parser->internalParse('{{{{FULLPAGENAM...')
  33. 32 /home/wikipathways.org/mediawiki/includes/content/WikitextContent.php(323): Parser->parse('{{{{FULLPAGENAM...', Object(Title), Object(ParserOptions), true, true, 94683)
  34. 33 /home/wikipathways.org/mediawiki/includes/content/AbstractContent.php(516): WikitextContent->fillParserOutput(Object(Title), 94683, Object(ParserOptions), true, Object(ParserOutput))
  35. 34 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolWorkArticleView.php(144): AbstractContent->getParserOutput(Object(Title), 94683, Object(ParserOptions))
  36. 35 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolCounterWork.php(123): PoolWorkArticleView->doWork()
  37. 36 /home/wikipathways.org/mediawiki/includes/page/Article.php(604): PoolCounterWork->execute()
  38. 37 /home/wikipathways.org/mediawiki/includes/actions/ViewAction.php(68): Article->view()
  39. 38 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(500): ViewAction->show()
  40. 39 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(294): MediaWiki->performAction(Object(Article), Object(Title))
  41. 40 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(861): MediaWiki->performRequest()
  42. 41 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(524): MediaWiki->main()
  43. 42 /home/wikipathways.org/mediawiki/index.php(42): MediaWiki->run()
  44. 43 {main}
Therapeutics Photodynamic therapy-induced HIF-1 survival signaling (Homo sapiens)
invalid pathway title: MWException: Unable to convert to /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png:

Status: 1

Message:

Command: gpml2 --id 'WP2868' --pathway-version '94683' /home/wikipathways.org/images/wikipathways/d/da/WP2868_94683.gpml /home/wikipathways.org/mediawiki/images/wikipathways/d/da/WP2868_94683.png in /home/wikipathways.org/extensions/GPMLConverter/src/Converter.php:110 Stack trace:

  1. 0 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(71): WikiPathways\GPML\Converter::convert('/home/wikipathw...', '/home/wikipathw...', Array)
  2. 1 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(40): WikiPathways\PathwayCache\Convertible->convert('/home/wikipathw...', '/home/wikipathw...')
  3. 2 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(73): WikiPathways\PathwayCache\Convertible->doRender()
  4. 3 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(83): WikiPathways\PathwayCache\Base->render()
  5. 4 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(193): WikiPathways\PathwayCache\Base->isCached()
  6. 5 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(84): WikiPathways\PathwayThumb::makeThumbLinkObj(Object(WikiPathways\Pathway), 'Photodynamic th...', 'https://vm1.wik...', 'Photodynamic th...', 'center', 'pwthumb', '250')
  7. 6 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayThumb::renderPathwayImage(Object(Parser), 'Pathway:WP2868', '250', 'center', 'Photodynamic th...', 'https://vm1.wik...', 'Photodynamic th...')
  8. 7 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pwImage', Array)
  9. 8 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  10. 9 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  11. 10 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  12. 11 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  13. 12 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{Template:Toda...')
  14. 13 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(651): Parser->internalParse('{{Template:Toda...', false, false)
  15. 14 /home/wikipathways.org/extensions/WikiPathways/src/PathwayOfTheDay.php(107): Parser->recursiveTagParse('{{Template:Toda...')
  16. 15 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayOfTheDay::get(Object(Parser), 'Saturday 25 May...', 'Portal:CPTAC/Ha...')
  17. 16 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pathwayOfTheDay', Array)
  18. 17 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  19. 18 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1727): PPFrame_DOM->expand(Object(DOMElement), 0)
  20. 19 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3302): PPTemplateFrame_DOM->cachedExpand('Portal:CPTAC/Ha...', Object(PPNode_DOM))
  21. 20 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  22. 21 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1798): PPFrame_DOM->expand(Object(DOMElement), 4)
  23. 22 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1810): PPTemplateFrame_DOM->getNamedArgument('contents')
  24. 23 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3801): PPTemplateFrame_DOM->getArgument('contents')
  25. 24 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1296): Parser->argSubstitution(Array, Object(PPTemplateFrame_DOM))
  26. 25 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  27. 26 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  28. 27 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  29. 28 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  30. 29 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  31. 30 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{{{FULLPAGENAM...')
  32. 31 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(443): Parser->internalParse('{{{{FULLPAGENAM...')
  33. 32 /home/wikipathways.org/mediawiki/includes/content/WikitextContent.php(323): Parser->parse('{{{{FULLPAGENAM...', Object(Title), Object(ParserOptions), true, true, 94683)
  34. 33 /home/wikipathways.org/mediawiki/includes/content/AbstractContent.php(516): WikitextContent->fillParserOutput(Object(Title), 94683, Object(ParserOptions), true, Object(ParserOutput))
  35. 34 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolWorkArticleView.php(144): AbstractContent->getParserOutput(Object(Title), 94683, Object(ParserOptions))
  36. 35 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolCounterWork.php(123): PoolWorkArticleView->doWork()
  37. 36 /home/wikipathways.org/mediawiki/includes/page/Article.php(604): PoolCounterWork->execute()
  38. 37 /home/wikipathways.org/mediawiki/includes/actions/ViewAction.php(68): Article->view()
  39. 38 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(500): ViewAction->show()
  40. 39 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(294): MediaWiki->performAction(Object(Article), Object(Title))
  41. 40 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(861): MediaWiki->performRequest()
  42. 41 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(524): MediaWiki->main()
  43. 42 /home/wikipathways.org/mediawiki/index.php(42): MediaWiki->run()
  44. 43 {main}

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Featured Pathways

invalid pathway title: MWException: Unable to convert to /home/wikipathways.org/mediawiki/images/wikipathways/8/81/WP3972_94683.png:

Status: 1

Message:

Command: gpml2 --id 'WP3972' --pathway-version '94683' /home/wikipathways.org/images/wikipathways/8/81/WP3972_94683.gpml /home/wikipathways.org/mediawiki/images/wikipathways/8/81/WP3972_94683.png in /home/wikipathways.org/extensions/GPMLConverter/src/Converter.php:110 Stack trace:

  1. 0 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(71): WikiPathways\GPML\Converter::convert('/home/wikipathw...', '/home/wikipathw...', Array)
  2. 1 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Convertible.php(40): WikiPathways\PathwayCache\Convertible->convert('/home/wikipathw...', '/home/wikipathw...')
  3. 2 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(73): WikiPathways\PathwayCache\Convertible->doRender()
  4. 3 /home/wikipathways.org/extensions/WikiPathways/src/PathwayCache/Base.php(83): WikiPathways\PathwayCache\Base->render()
  5. 4 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(193): WikiPathways\PathwayCache\Base->isCached()
  6. 5 /home/wikipathways.org/extensions/WikiPathways/src/PathwayThumb.php(84): WikiPathways\PathwayThumb::makeThumbLinkObj(Object(WikiPathways\Pathway), 'PDGFR-beta path...', 'https://vm1.wik...', , , 'pwthumb', '250px')
  7. 6 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3426): WikiPathways\PathwayThumb::renderPathwayImage(Object(Parser), 'Pathway:WP3972', '250px', , 'PDGFR-beta path...')
  8. 7 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3127): Parser->callParserFunction(Object(PPTemplateFrame_DOM), 'pwImage', Array)
  9. 8 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  10. 9 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1727): PPFrame_DOM->expand(Object(DOMElement), 0)
  11. 10 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3302): PPTemplateFrame_DOM->cachedExpand('Portal:CPTAC/Fe...', Object(PPNode_DOM))
  12. 11 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  13. 12 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1798): PPFrame_DOM->expand(Object(DOMElement), 4)
  14. 13 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1810): PPTemplateFrame_DOM->getNamedArgument('contents')
  15. 14 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3801): PPTemplateFrame_DOM->getArgument('contents')
  16. 15 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1296): Parser->argSubstitution(Array, Object(PPTemplateFrame_DOM))
  17. 16 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  18. 17 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  19. 18 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(3305): PPFrame_DOM->expand(Object(DOMElement))
  20. 19 /home/wikipathways.org/mediawiki/includes/parser/Preprocessor_DOM.php(1277): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  21. 20 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(2942): PPFrame_DOM->expand(Object(DOMElement), 0)
  22. 21 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(1293): Parser->replaceVariables('{{{{FULLPAGENAM...')
  23. 22 /home/wikipathways.org/mediawiki/includes/parser/Parser.php(443): Parser->internalParse('{{{{FULLPAGENAM...')
  24. 23 /home/wikipathways.org/mediawiki/includes/content/WikitextContent.php(323): Parser->parse('{{{{FULLPAGENAM...', Object(Title), Object(ParserOptions), true, true, 94683)
  25. 24 /home/wikipathways.org/mediawiki/includes/content/AbstractContent.php(516): WikitextContent->fillParserOutput(Object(Title), 94683, Object(ParserOptions), true, Object(ParserOutput))
  26. 25 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolWorkArticleView.php(144): AbstractContent->getParserOutput(Object(Title), 94683, Object(ParserOptions))
  27. 26 /home/wikipathways.org/mediawiki/includes/poolcounter/PoolCounterWork.php(123): PoolWorkArticleView->doWork()
  28. 27 /home/wikipathways.org/mediawiki/includes/page/Article.php(604): PoolCounterWork->execute()
  29. 28 /home/wikipathways.org/mediawiki/includes/actions/ViewAction.php(68): Article->view()
  30. 29 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(500): ViewAction->show()
  31. 30 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(294): MediaWiki->performAction(Object(Article), Object(Title))
  32. 31 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(861): MediaWiki->performRequest()
  33. 32 /home/wikipathways.org/mediawiki/includes/MediaWiki.php(524): MediaWiki->main()
  34. 33 /home/wikipathways.org/mediawiki/index.php(42): MediaWiki->run()
  35. 34 {main}

Zhang, et al. Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer

View featured pathways
List of all pathways for this portal

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Pathway Curation

On this page you see rotating displays of hallmark and featured pathways. Where did these pathways come from? They came from people like you! The CPTAC set of pathways can be edited, fixed and added to using the pathway drawing and annotation tools here at WikiPathways.

Getting Started

Resources

Curation projects

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Useful Links